PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0037s0099.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 440aa    MW: 48719.7 Da    PI: 6.9651
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0037s0099.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.53e-12169248274
             trihelix   2 WtkqevlaLiearr....emeerlrrg..klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtse 74 
                          W   e+l+Li+a++    + + + +r+  +  +++ +++ ++mr++ +  r ++ Ck+kwe l+++yk ike+++k  ++
  Mapoly0037s0099.1.p 169 WEAWEILLLIQAKKaefeRYWGHPGRErlENSAQKYKRIVDYMRQHRVmDRDATACKNKWEALSGEYKVIKEWDRKPGNP 248
                          9999**********5555444444444236789**********9998879************************995444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.2E-8167247No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MDDESAFIDL ATPAEDPVVS VPSAHSGGST IRSNAASPTE CVAGVHHGAA TNSTAQSAIT  60
RTGTSPLGPM HLPPNSPSLL PLSPHIPCLC MAPPVQAMTN YVAMPFHASH SMHGTHQPHI  120
PPVVFPSMTS PALQQRQESQ SLVQERDSST FENHHSGPAS RTRKRSRNWE AWEILLLIQA  180
KKAEFERYWG HPGRERLENS AQKYKRIVDY MRQHRVMDRD ATACKNKWEA LSGEYKVIKE  240
WDRKPGNPTY SSLSFQERKQ NNLPTSFETE AQELMDSFQG SRQHMVPPSV VDSTIRHSMS  300
AGGTRAITVV PPGADSTVRH SPSAGDGGEG STAEDEREQV PPTEEPEHIE IWASGKRKKS  360
CGNVVAAFQE LSQSIMRIEK ERADRAREAN EMAKDAHLLE MRKFEFLQMK MDREDERAEK  420
FVGVLGSIAG AFHKMAEKM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1235125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.15e-10Trihelix family protein